rs12547220 chr8:126558443 G>A
- Sequence
gtagatccggctccgggctcccgg[G/A]cgggagcgcagcccgtggcattta
- ASB in cell types
- 22RV1 (prostate carcinoma) CD34+ hematopoietic stem cells HUVEC-C (HUVEC, umbilical vein endothelial cells) foreskin keratinocyte
- ASB for transcription factors
- ANDR_HUMAN TIF1B_HUMAN ERG_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.84 | -5.17 | 2.00 | n/a | No Hit | |||
| TIF1B_HUMAN | 2.62 | -4.84 | 2.00 | n/a | n/a | |||
| ERG_HUMAN | -2.06 | 2.35 | 1.50 | n/a | No Hit |
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