rs12563639 chr1:235503830 G>A
- Sequence
gcacacgaggttccgctcccgggc[G/A]aacgggcggcgtcggacatcacta
- ASB in cell types
- 22RV1 (prostate carcinoma) CD14+ monocytes
- ASB for transcription factors
- ANDR_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.54 | -0.00 | 2.00 | n/a | No Hit | |||
| STAT1_HUMAN | 1.89 | -0.75 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Colon_Sigmoid, Colon_Transverse, Esophagus_Muscularis, Lung, Nerve_Tibial, Stomach, Thyroid