ADASTRA v5.1.3
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rs12565639
chr1:8841332
G
>
A
Sequence
aactgtgtcccctaacaaagctac[G/A]tcgaagttgtagccttatttggtg
ASB in cell types
LNCaP C4-2B (prostate carcinoma)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
LNCaP C4-2B (prostate carcinoma)
2.27
n/a
0.04
1.00
1.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
amyotrophic lateral sclerosis (als)
,
glaucoma (normal pressure glaucoma)
,
glaucoma (primary open-angle glaucoma)
,
hip bone mineral density (bmd)
,
spine bone mineral density (bmd)
GTEx eQTL
Cells_Cultured_fibroblasts
,
Muscle_Skeletal
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale