rs1256925 chr1:201501942 C>T
- Sequence
ggagatggaggttgcagtgagcag[C/T]gatcttgccactgcactccagcct
- ASB in cell types
- HEK293 (embryonic kidney) A549 (lung carcinoma)
- ASB for transcription factors
- ZN426_HUMAN ZNF34_HUMAN ZC11A_HUMAN ZN394_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN426_HUMAN | n/a | 2.93 | 2.00 | n/a | n/a | |||
| ZNF34_HUMAN | n/a | 2.86 | 2.00 | n/a | n/a | |||
| ZC11A_HUMAN | n/a | 3.69 | 2.00 | n/a | n/a | |||
| ZN394_HUMAN | n/a | 3.23 | 2.00 | n/a | No Hit | |||
| ZN555_HUMAN | n/a | 3.27 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Liver, Lung, Nerve_Tibial, Thyroid, Whole_Blood