rs12574183 chr11:79060197 G>A
- Sequence
caggccagcttctcactgcctccc[G/A]acccccagcctgttggcctctcac
- ASB in cell types
- MCF7L-P(immortalized breast epithelial cell line) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN AHRR_HUMAN GATA3_HUMAN SNF5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.17 | 1.12 | 1.55 | n/a | No Hit | |||
| AHRR_HUMAN | -3.78 | 1.11 | 2.00 | n/a | n/a | |||
| GATA3_HUMAN | -0.14 | 1.33 | 1.50 | n/a | No Hit | |||
| SNF5_HUMAN | -0.02 | 1.46 | 1.00 | n/a | n/a |
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