rs12577651 chr11:79060193 T>C
- Sequence
ctgacaggccagcttctcactgcc[T/C]cccgacccccagcctgttggcctc
- ASB in cell types
- MCF7L-P(immortalized breast epithelial cell line) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- AHRR_HUMAN SNF5_HUMAN ERR1_HUMAN FOXA1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| AHRR_HUMAN | -0.50 | 1.04 | 2.00 | n/a | n/a | |||
| SNF5_HUMAN | -0.10 | 1.33 | 1.00 | n/a | n/a | |||
| ERR1_HUMAN | -2.08 | 2.45 | 1.00 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.27 | 1.04 | 1.55 | n/a | No Hit | |||
| GATA3_HUMAN | -0.11 | 1.30 | 1.50 | n/a | No Hit |
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