rs12585587 chr13:27450557 G>A

Sequence
tactgtagcggacgcaagtacagc[G/A]gatctgcggcgagtccccttcgct
ASB in cell types
Peyer's patch HepG2 (hepatoblastoma)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Peyer's patch 2.27 n/a 0.021.00 1.00
HepG2 (hepatoblastoma) 0.75 0.38 0.020.90 1.17
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi) hdl cholesterol height triglycerides
GTEx eQTL Adipose_Subcutaneous Cells_EBV-transformed_lymphocytes Esophagus_Mucosa Heart_Left_Ventricle Lung Muscle_Skeletal Skin_Sun_Exposed_Lower_leg Spleen Testis Thyroid Whole_Blood

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