ADASTRA v5.1.3
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rs12593802
chr15:65318982
C
>
A
Sequence
cagtagggatcaggcctctgttcc[C/A]gtggctgtaatccttgttaattcc
ASB in cell types
HEK293 (embryonic kidney)
K562 (myelogenous leukemia)
GM12878 (female B-cells lymphoblastoid cell line)
GM12864 (male B-cells)
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(+2 others)
ASB for transcription factors
ZN426_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN426_HUMAN
n/a
3.14
1.00
7.3·10
-5
1.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Aorta
,
Artery_Tibial
,
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Brain_Spinal_cord_cervical_c-1
,
Cells_Cultured_fibroblasts
,
Colon_Transverse
,
Esophagus_Mucosa
,
Lung
,
Nerve_Tibial
,
Pancreas
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)