rs1259604 chr10:75359307 A>G

Sequence
gcacagttcctcattcattctttc[A/G]taacatcagcaaattcttcctgag
ASB in cell types
A549 (lung carcinoma) K562 (myelogenous leukemia)
ASB for transcription factors
MAFK_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MAFK_HUMAN n/a 2.67 1.008.7·10-4 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium,  body mass index (bmi),  hdl cholesterol,  height,  homa-ir,  lung function, predicted ratio of forced expiratory volume in 1 second (fev1) to forced vital capacity (fvc) (fev1/fvc),  salmonella-induced pyroptosis
GTEx eQTL Artery_Tibial,  Testis

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