rs12620759 chr2:28558140 G>A

Sequence
atgtacacacagacataaacatag[G/A]ggggtgtgtgtgtctctgtgtgtg
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
CREB1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CREB1_HUMAN n/a 2.82 1.000.01 2.00 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium,  college completion,  infant head circumference,  lung function, ratio of forced expiratory volume in 1 second (fev1) to forced vital capacity (fvc) (fev1/fvc) ratio percent predicted (in asthmatic participants),  total cholesterol
GTEx eQTL Thyroid

Download