rs1262593 chr11:115920633 C>T
- Sequence
agatacccttatttccccccattt[C/T]caatgggtaaactgaggctgcagg
- ASB in cell types
- MS-1 (Small cell lung carcinoma) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.15 | 2.33 | 1.00 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.92 | -0.98 | 1.00 | n/a | n/a |
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