rs12685582 chr9:129711906 A>C

Sequence
gggccacttgtgtccttgctgatg[A/C]tgccaggcagtggctaaggatgtg
ASB in cell types
CTV-1 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
SMCA4_HUMAN SPI1_HUMAN ETS1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN -0.23 1.43 1.001.8·10-3 1.00 n/a n/a
SPI1_HUMAN 0.65 0.98 0.970.02 1.17 n/a No Hit
ETS1_HUMAN -0.83 1.05 1.000.03 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol systolic blood pressure (sbp)
GTEx eQTL Artery_Coronary Artery_Tibial Testis

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