rs12689158 chrX:47752051 T>G

Sequence
gatgagtgatgaaatagctttctg[T/G]ggagaggggatacgtgggtggacc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) GM12892 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 0.39 1.97 0.980.01 2.17 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP rheumatoid arthritis tetrology of fallot
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24 Esophagus_Mucosa Heart_Atrial_Appendage Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Spleen

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