ADASTRA v5.1.3
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rs12694164
chr2:209208411
A
>
C
Sequence
aagcatacaacattccttatcaca[A/C]actaaacttccttttcactcaccc
ASB in cell types
MS-1 (Small cell lung carcinoma)
HMEC (human mammary epithelial cells)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MS-1 (Small cell lung carcinoma)
0.82
-0.36
2.9·10
-4
1.00
1.00
HMEC (human mammary epithelial cells)
-2.66
2.57
1.00
8.4·10
-3
1.00
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
diabetic retinopathy in type 2 diabetes mellitus
GTEx eQTL
Cells_Cultured_fibroblasts
,
Lung
,
Pancreas
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale