rs12721675 chr6:29942827 C>A
- Sequence
ccgcggggagccccgcttcatcgc[C/A]gtgggctacgtggacgacacgcag
- ASB in cell types
- HCT-116 (colon carcinoma) primary B-CLL cells K562 (myelogenous leukemia) Peyer's patch
- ASB for transcription factors
- RAD21_HUMAN MBD4_HUMAN BRD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 2.41 | -0.57 | 1.11 | n/a | n/a | |||
| MBD4_HUMAN | 1.60 | -0.88 | 1.00 | n/a | n/a | |||
| BRD4_HUMAN | 1.69 | n/a | 2.50 | n/a | n/a |
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