rs12747775 chr1:18464840 C>T

Sequence
aaggttctggaagagcaggttcca[C/T]gtcctcctcgtccagacttggaac
ASB in cell types
breast tumor 22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 1.27 -0.20 0.021.00 1.79 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease,  obesity with early age of onset (age >2),  serum creatinine,  sporadic creutzfeldt-jakob disease
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Esophagus_Mucosa,  Lung,  Pancreas,  Pituitary,  Thyroid

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