rs12780588 chr10:69045848 G>T

Sequence
tccacttccaatctgtggtgcaac[G/T]tatgtaacacagcaaatcagtaag
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) CD14+ monocytes
ASB for transcription factors
STAT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 1.72 -1.19 7.3·10-31.00 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP obesity with early age of onset (age >2)
GTEx eQTL Colon_Sigmoid Colon_Transverse Lung Muscle_Skeletal Nerve_Tibial Skin_Sun_Exposed_Lower_leg Thyroid Whole_Blood

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