rs1280972 chr1:10918005 A>G
- Sequence
ctttagcacagcgggtttatcttc[A/G]gacaacaggctcttaaccctctgt
- ASB in cell types
- Jurkat (T-cells) CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- MYB_HUMAN GATA3_HUMAN GATA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MYB_HUMAN | 1.92 | -0.46 | 1.50 | n/a | No Hit | |||
| GATA3_HUMAN | 2.07 | -0.97 | 1.25 | n/a | No Hit | |||
| GATA1_HUMAN | 1.87 | -1.30 | 1.50 | -0.17 | Weak Concordant |
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Motif analysis
