rs1283177 chr12:52025798 C>G
- Sequence
atgtgaagggatccaccttcctcc[C/G]ttataagaggtagcagtacctcct
- ASB in cell types
- epidermal keratinocytes neutrophils from periferal blood CD20+
- ASB for transcription factors
- SPI1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.96 | -1.05 | 1.83 | -1.11 | Weak Concordant | |||
| CTCF_HUMAN | 0.83 | 0.52 | 1.21 | n/a | No Hit |
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Motif analysis
