rs12850 chr7:128310672 G>A
- Sequence
atgtacacagtccagggcacctcc[G/A]agcacagtggcagtgcccttgggg
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- HNF4A_HUMAN ZNF24_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HNF4A_HUMAN | 2.10 | 0.27 | 1.62 | n/a | No Hit | |||
| ZNF24_HUMAN | 2.20 | -0.95 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP autism with low iq, ldl cholesterol change with statins, total cholesterol change with statins, triglycerides change with statins
GTEx eQTL Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood