rs12875423 chr13:81142718 G>A
- Sequence
agaaatgaatatgacaggattcca[G/A]taaaatttaaaagcaaacacacaa
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN HXB13_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.56 | 2.14 | 1.70 | n/a | No Hit | |||
| HXB13_HUMAN | -2.49 | 2.66 | 1.75 | 3.84 | Concordant |
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Motif analysis
