rs12935405 chr16:57300448 T>C
- Sequence
caagacatcataacctcactgatc[T/C]gcggtgttgatgaggaaaagtaat
- ASB in cell types
- HepG2 (hepatoblastoma) K562 (myelogenous leukemia) foreskin keratinocyte HCT-116 (colon carcinoma)
- ASB for transcription factors
- TIF1B_HUMAN MK14_HUMAN AFF1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TIF1B_HUMAN | 2.00 | 0.19 | 2.67 | n/a | n/a | |||
| MK14_HUMAN | 0.34 | 2.52 | 2.00 | n/a | n/a | |||
| AFF1_HUMAN | -1.09 | 2.19 | 2.00 | n/a | n/a |
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