rs12958513 chr18:45686951 C>G
- Sequence
tctcactgttgttggggactcacc[C/G]tgcaccacaaagaagactagataa
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- NCOR1_HUMAN HDAC2_HUMAN ERR1_HUMAN REQU_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NCOR1_HUMAN | 2.81 | n/a | 2.00 | n/a | n/a | |||
| HDAC2_HUMAN | 3.24 | n/a | 2.00 | n/a | n/a | |||
| ERR1_HUMAN | 2.69 | -2.43 | 1.00 | n/a | No Hit | |||
| REQU_HUMAN | 2.24 | -0.55 | 1.25 | n/a | n/a | |||
| SMCA4_HUMAN | 2.16 | -2.08 | 1.25 | n/a | n/a |
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