rs12970899 chr18:23568899 A>G
- Sequence
cgtctggtttgtaacaggatcaac[A/G]taatcttcagtagctgtaacattc
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.71 | -1.91 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP amyotrophic lateral sclerosis (als) age of onset, hdl cholesterol, late onset alzheimers disease, lp-pla2 activity, urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Cortex, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Heart_Left_Ventricle, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg