rs12980030 chr19:7427255 C>T

Sequence
atgttgccccagctgcctcacttt[C/T]gcaaggtgggcccaacggcaagtg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) CAR-T cells
ASB for transcription factors
COT1_HUMAN IRF4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
COT1_HUMAN 4.10 -4.09 3.9·10-91.00 1.00 n/a No Hit
IRF4_HUMAN 2.07 -1.50 6.8·10-31.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Muscle_Skeletal Whole_Blood

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