rs12996406 chr2:72724252 C>A

Sequence
aggggaaggtaagatgaacacttc[C/A]acaatctcagacaaggcagataaa
ASB for transcription factors
SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 2.52 -1.55 0.011.00 2.00 -3.89 Concordant
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Motif analysis

SPI1_HUMAN Concordant
SPI1_HUMAN pic

Genetic associations

GRASP aortic valve calcium,  diastolic blood pressure (dbp),  systolic blood pressure (sbp)
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Esophagus_Muscularis,  Nerve_Tibial,  Pancreas,  Whole_Blood

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