rs130058 chr6:77463564 T>A
- Sequence
gttcacagctgaaactagaggtca[T/A]gggtgcggcagccaaggcaggcgg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- COT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COT1_HUMAN | -3.55 | 3.79 | 1.00 | 0.47 | Weak Concordant |
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Motif analysis
