rs13019322 chr2:15371146 G>A

Sequence
cactaggactgatggtttaaaagc[G/A]cggcacttcctcgttctcaaatat
ASB in cell types
monocyte-derived dendritic cells
ASB for transcription factors
SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN -0.61 2.13 1.007.1·10-6 1.83 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP college completion,  parkinsons disease,  years of education
GTEx eQTL Adipose_Subcutaneous,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Cortex,  Brain_Hippocampus,  Brain_Nucleus_accumbens_basal_ganglia,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Muscle_Skeletal,  Nerve_Tibial,  Spleen,  Testis,  Thyroid

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