rs13025334 chr2:122385055 A>C
- Sequence
agcgattagaagcagctcggcatt[A/C]aagtataactgatgacaatccaat
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.60 | 2.02 | 1.87 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP chronic kidney disease, cystatin c in serum, lp-pla2 activity, major depressive disorder, urinary albumin-to-creatinine ratio