ADASTRA v5.1.3
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rs13032090
chr2:120587112
C
>
T
Sequence
gcctggatcgaggcacgctgtccc[C/T]gcgccgcccgcactgccaagggca
ASB in cell types
HS-SY-2(Monophasic synovial sarcoma)
ASB for transcription factors
KDM2B_HUMAN
SMCA4_HUMAN
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0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KDM2B_HUMAN
n/a
2.33
1.00
4.3·10
-4
3.00
n/a
n/a
SMCA4_HUMAN
n/a
2.75
1.00
1.7·10
-3
3.00
n/a
n/a
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Breast_Mammary_Tissue
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)