rs130347 chr22:42680803 T>C
- Sequence
cacagccaggaatcatgactgcac[T/C]gagtcatcacccacagaattgtca
- ASB in cell types
- renal cortex SUM159PT (Triple negative breast cancer)
- ASB for transcription factors
- CREB1_HUMAN BRD2_HUMAN FOS_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CREB1_HUMAN | 1.84 | -1.61 | 1.00 | -1.52 | Weak Concordant | |||
| BRD2_HUMAN | 2.17 | n/a | 1.00 | n/a | n/a | |||
| FOS_HUMAN | 2.27 | -2.27 | 1.00 | n/a | n/a |
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Motif analysis
