ADASTRA v5.1.3
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rs13062
chr2:218395928
C
>
A
Sequence
caacccattttccagacagtaaaa[C/A]ggcggcgcacttctttctccgtca
ASB in cell types
glioblastoma cells
MV-4-11 (Childhood acute monocytic leukemia)
adult erythroblasts
ASB for transcription factors
BRD4_HUMAN
CTCF_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BRD4_HUMAN
0.33
1.30
1.00
8.5·10
-3
1.64
n/a
n/a
CTCF_HUMAN
0.51
0.96
1.00
0.02
1.28
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
body mass index (bmi)
,
height
GTEx eQTL
Artery_Tibial
,
Brain_Caudate_basal_ganglia
,
Brain_Cortex
,
Cells_Cultured_fibroblasts
,
Heart_Left_Ventricle
,
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)