rs13063024 chr3:111859198 C>T
- Sequence
ttcgctgtctggtgaggaaatcat[C/T]accctaggacgtaaaccctcccgc
- ASB in cell types
- foreskin keratinocyte GM19238 (female B-cells lymphoblastoid cell lines) A549 (lung carcinoma) HEK293 (embryonic kidney)
- ASB for transcription factors
- CTCF_HUMAN CREB1_HUMAN ANDR_HUMAN SMRC1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.24 | 2.21 | 1.87 | n/a | No Hit | |||
| CREB1_HUMAN | 2.00 | 0.51 | 1.00 | n/a | No Hit | |||
| ANDR_HUMAN | -1.17 | 2.29 | 2.00 | n/a | No Hit | |||
| SMRC1_HUMAN | 1.50 | -1.00 | 1.00 | n/a | n/a |
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