rs13104914 chr4:2375686 C>T

Sequence
gcgggacacaggactgtgccgccc[C/T]cacctcttatcacaggctgagaaa
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
RING2_HUMAN REQU_HUMAN NFIC_HUMAN CR3L1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RING2_HUMAN 3.34 n/a 4.0·10-31.00 2.00 n/a n/a
REQU_HUMAN 2.98 -5.32 9.2·10-31.00 2.00 n/a n/a
NFIC_HUMAN 2.72 -4.94 0.031.00 2.00 n/a No Hit
CR3L1_HUMAN 3.03 -5.54 0.041.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration,  advanced age-related macular degeneration (choroidal neovascularization) vs. no amd,  suicide attempts in bipolar disorder (females),  triglycerides
GTEx eQTL Cells_Cultured_fibroblasts,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Muscle_Skeletal

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