rs13138042 chr4:8260936 G>C

Sequence
ctccggccttgtaaacctgccggg[G/C]gagcttcctgccgctgagcacttg
ASB in cell types
MCF7 (Invasive ductal breast carcinoma) MCF7 WS8 cells
ASB for transcription factors
GRHL2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GRHL2_HUMAN -0.63 3.44 1.002.5·10-8 2.50 4.41 Concordant
Items per page:
1 – 1 of 1

Motif analysis

GRHL2_HUMAN Concordant
GRHL2_HUMAN pic

Genetic associations

GTEx eQTL Brain_Cortex Lung Nerve_Tibial Thyroid

Download