rs1314913 chr14:68232877 C>T
- Sequence
attaatcattttcttgttctgact[C/T]attcaggcctctagaaaaatagct
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HUVEC-C (HUVEC, umbilical vein endothelial cells) renal cortex neural progenitors
- ASB for transcription factors
- P53_HUMAN TF65_HUMAN STAG1_HUMAN CREB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| P53_HUMAN | 3.27 | -2.97 | 1.00 | 2.25 | Discordant | |||
| TF65_HUMAN | 1.59 | n/a | 3.00 | n/a | No Hit | |||
| STAG1_HUMAN | 1.76 | -0.26 | 1.00 | n/a | n/a | |||
| CREB1_HUMAN | 2.06 | -1.81 | 1.00 | n/a | No Hit | |||
| NOTC1_HUMAN | 1.94 | n/a | 3.00 | n/a | n/a |
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Motif analysis
