rs13165 chr2:197499794 G>A
- Sequence
aaggccgcgtacctgcggggcggc[G/A]gcaaggcgtgcgctcggcgagaca
- ASB in cell types
- CD14+ monocytes HepG2 (hepatoblastoma)
- ASB for transcription factors
- STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.50 | -1.33 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Aorta, Cells_Cultured_fibroblasts, Muscle_Skeletal, Nerve_Tibial, Testis, Thyroid, Whole_Blood