rs13213319 chr6:70371673 T>G

Sequence
caacatttgtacatttaaagctag[T/G]aaagaaaccagaatttcttcaatc
ASB in cell types
erythroid progenitors GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
NFAC3_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NFAC3_HUMAN 2.49 -2.10 0.031.00 1.00 n/a No Hit
STAG1_HUMAN 0.85 1.30 0.590.04 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose advanced age-related macular degeneration (choroidal neovascularization) vs. no amd
GTEx eQTL Adrenal_Gland Skin_Sun_Exposed_Lower_leg Testis

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