rs13219815 chr6:17706173 G>A

Sequence
agcctcactcgggcctttcctcag[G/A]ccctcctgtctgctccacgtgggg
ASB in cell types
HL-60 (acute myeloid leukemia) 22RV1 (prostate carcinoma) Th1-cells
ASB for transcription factors
TBX21_HUMAN INT13_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TBX21_HUMAN 1.61 -1.17 0.021.00 1.00 n/a No Hit
INT13_HUMAN 1.47 0.14 0.041.00 1.00 n/a n/a
ANDR_HUMAN 2.52 -0.13 0.050.96 1.75 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP paternal transmission distortion stabilized warfarin dose
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Breast_Mammary_Tissue Cells_Cultured_fibroblasts Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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