rs1323806 chr9:107243804 C>T
- Sequence
tccagagaggctttcaaaggaagt[C/T]gtggaatcttctgtggcaataaca
- ASB in cell types
- HCT-116 (colon carcinoma)
- ASB for transcription factors
- SP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SP1_HUMAN | -0.98 | 2.12 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP alcohol dependence, college completion, hdl cholesterol, hip bone mineral density (bmd), years of education