rs13245955 chr7:95871280 C>G

Sequence
gaagcaaacaagtagcaccctctg[C/G]tggtgagcttttaaaccaaccaac
ASB in cell types
HMEC (human mammary epithelial cells) SYO-1(Biphasic synovial sarcoma)
ASB for transcription factors
CTCF_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.57 0.88 1.006.7·10-4 1.22 1.11 Weak Concordant
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Motif analysis

CTCF_HUMAN Weak Concordant
CTCF_HUMAN pic

Genetic associations

GRASP acute lung injury following major trauma,  coronary artery disease (cad),  urinary albumin-to-creatinine ratio,  waist hip ratio

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