rs1325045 chr6:155314910 T>C

Sequence
gtgcttagaggcaaagctactgtt[T/C]gttagcaattctttcttactgtga
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) HepG2 (hepatoblastoma)
ASB for transcription factors
BMI1_HUMAN TYY1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BMI1_HUMAN 3.32 n/a 3.1·10-41.00 1.00 n/a n/a
TYY1_HUMAN -0.40 2.30 0.991.2·10-3 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP age at death with kuru exposure eye color sporadic creutzfeldt-jakob disease
GTEx eQTL Brain_Caudate_basal_ganglia

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