rs132653 chr22:36160775 G>T
- Sequence
ataataaccagacacgttctccag[G/T]ctctgagatataccctggaaccca
- ASB in cell types
- 22RV1 (prostate carcinoma) CD14+ monocytes HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- ANDR_HUMAN STAT1_HUMAN TCF21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | n/a | 3.01 | 2.00 | n/a | No Hit | |||
| STAT1_HUMAN | -0.02 | 1.69 | 1.75 | n/a | No Hit | |||
| TCF21_HUMAN | n/a | 2.68 | 2.50 | n/a | n/a |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP abnormal involuntary movement scale, arthritis including non-rheumatoid, chronic kidney disease, focal segmental glomerulosclerosis, height, longstanding arthritis, refractive error, rheumatoid arthritis, serum creatinine, simpson-angus scale