rs132704 chr22:36195228 T>C

Sequence
gcagagggggctgcctggaggagg[T/C]gtgcctgccagagaaaactagccc
ASB in cell types
foreskin keratinocyte GM02630 (Fanconi anemi)
ASB for transcription factors
CTCF_HUMAN RAD21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.14 0.47 9.5·10-31.00 1.43 2.35 Discordant
RAD21_HUMAN 1.08 -0.15 0.031.00 1.47 n/a n/a
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Motif analysis

CTCF_HUMAN Discordant
CTCF_HUMAN pic

Genetic associations

GTEx eQTL Adrenal_Gland Pituitary Thyroid

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