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rs132846 chr22:45163312 A>G

Sequence
tacgggccaggagacctcagcgca[A/G]aaagcgcaggactcgttcccctgc
ASB in cell types
HCASMC (Human coronary artery smooth muscle cells)
ASB for transcription factors
TCF21_HUMAN BRD4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TCF21_HUMAN n/a 2.78 1.005.0·10-3 3.00 n/a n/a
BRD4_HUMAN -0.89 1.63 1.000.03 1.67 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol prop taste detection threshold urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Visceral_Omentum Brain_Amygdala Brain_Anterior_cingulate_cortex_BA24 Brain_Caudate_basal_ganglia Brain_Cerebellar_Hemisphere Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Hippocampus Brain_Hypothalamus Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Breast_Mammary_Tissue Esophagus_Mucosa Pancreas Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid Whole_Blood

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