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rs133016 chr22:38176575 C>T

Sequence
cagagcaggctggaaactcagggt[C/T]cactcagagtgccaagctgcccca
ASB in cell types
BEAS-2B (bronchial epithelium) macrophages form periferal blood
ASB for transcription factors
GCR_HUMAN ERG_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN -0.35 1.76 1.001.8·10-7 1.50 n/a No Hit
ERG_HUMAN -2.07 1.86 1.000.01 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight body mass index (bmi) hdl cholesterol height infant head circumference ldl cholesterol myopia parkinsons disease serum creatinine total cholesterol triglycerides
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Tibial Brain_Caudate_basal_ganglia Brain_Putamen_basal_ganglia Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Lung Nerve_Tibial Pancreas Pituitary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Spleen Stomach Testis Thyroid Whole_Blood

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