rs13326080 chr3:15311218 A>G

Sequence
tttcccaggcattatctgagacac[A/G]caacaaccctgtaaaacaggctca
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF1_HUMAN SMCA5_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN 2.59 0.53 0.011.00 1.00 n/a No Hit
SMCA5_HUMAN 2.76 -2.50 0.011.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts Muscle_Skeletal

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