rs133415 chr22:35410245 G>T
- Sequence
ttccctgtttcaacatctcatttt[G/T]aaaacaggaaatgaaaacccagag
- ASB in cell types
- CD14+ monocytes monocyte-derived macrophages from peripheral blood MDM(monocyte derived macrophages) GM12892 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- STAT1_HUMAN SPI1_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 3.53 | n/a | 2.00 | n/a | No Hit | |||
| SPI1_HUMAN | 1.75 | 0.32 | 1.47 | -0.98 | Weak Concordant | |||
| STAG1_HUMAN | 1.61 | -0.61 | 1.00 | n/a | n/a |
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Motif analysis
