rs133416 chr22:35410383 T>C

Sequence
gagaggctaaagggcaccacacag[T/C]gagctgacagcagacacgtggaga
ASB in cell types
monocyte-derived dendritic cells monocytes from periferal blood
ASB for transcription factors
SRBP2_HUMAN SPI1_HUMAN TF65_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SRBP2_HUMAN -1.47 2.36 1.001.6·10-3 3.00 n/a No Hit
SPI1_HUMAN 0.69 2.39 0.041.8·10-3 1.40 n/a No Hit
TF65_HUMAN n/a 2.44 1.000.01 2.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence,  coronary artery disease (cad),  hypertension (early onset hypertension),  resistance to kuru in aged women despite likely exposure,  waist hip ratio
GTEx eQTL Whole_Blood

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