rs133770 chr22:44449636 T>C
- Sequence
ctcattctctgaactgctgattca[T/C]tctctgagcttcggcatctttgtc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF1_HUMAN JUN_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.57 | n/a | 1.50 | n/a | No Hit | |||
| JUN_HUMAN | 1.28 | -2.49 | 1.25 | -0.52 | Weak Concordant |
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Motif analysis
